Keywords = Prevalence
Microbiology

Isolation and molecular detection of Salmonella enterica serovars Typhimurium from poultry processing environments at wet markets in Sulaymaniyah province, Iraq

Volume 17, Issue 6, June 2026, Pages 391-397

Khoshi Ari Muhammed, Eman Dhahir Arif

Abstract Non-typhoidal Salmonella is a predominant etiological agent of foodborne infections globally. Salmonella serovars are present throughout the chicken's digestive tract, particularly in the ceca. This study, conducted from October 2024 to April 2025, employed cultural methods to isolate and identify Salmonella from samples collected at the broiler chicken wet market in Sulaymaniyah province, Iraq. The research additionally examined the prevalence of S. enterica serovar Typhimurium in these samples by PCR. Two-hundred and ten samples were obtained from the cecum, cutting boards, knives, body swabs, workers' hands, and water. Salmonella was isolated from the samples and identified by culturing and molecular techniques. Consequently, 103 individuals (49.04%) tested positive for Salmonella via culture. The PCR results revealed that the contamination rate for S. enterica was 74 (71.84%); 47 (63.51%) were S. Typhimurium, and 33 (70.21%) of S. Typhimurium possessed the hilA gene. The highest prevalence was observed in chopping boards, with 91.67% for S. enterica, whereas the maximum rate for S. Typhimurium was recorded in water, at 100%. The phylogenetic tree indicates that the Iraqi isolate with accession number of PV250092 belongs to the principal group of isolates, exhibiting a bootstrap support value of 100%, signifying a robust genetic association with them. To conclude, this research demonstrated a notable prevalence of Salmonella in the broiler chicken processing environment, particularly a high incidence of S. Typhimurium isolates. The placement of the Iraqi isolate within the global isolate clade suggests a recent common ancestor with other isolates, indicating global transmission pathways.

Parasitology

Identification of Trichinella species among wild carnivores in north, northeast, and northwest provinces of Iran

Volume 16, Issue 9, September 2025, Pages 515-521

Mohammad Reza Khoshvaght, Elahe Ebrahimzadeh, Nooshinmehr Soleymani, Moein Abolhasani Darounkola, Hassan Borji

Abstract Trichinella britovi is a species circulating in Iran and has already been observed in wild and domestic carnivores. The present study aims to determine the occurrence of Trichinella species in Iran's most important provinces, including the northern, northeastern, and northwest regions. In total, 93 carcasses of golden jackals, collected due to road accidents between 2019 and 2022, have been obtained from Ardabil, Mazandaran, Golestan, North Khorasan, and Khorasan Razavi provinces, Iran. Genomic DNA (four positives out of 93 carcasses) from each Trichinella genotype was amplified in a multiplex polymerase chain reaction (PCR) reaction. To confirm the multiplex PCR results, the sequences of the PCR products with cytochrome oxidase subunit I were sent to a reference laboratory within the European Union. Bioinformatics software was used to verify the sequencing results of primer fragments and to compare and analyze the results obtained with the sequences stored in the NCBI genetic database. Following multiplex PCR amplification, a two-band pattern was observed. Trichinella britovi larvae displayed the expected band pattern of 127 bp and 253 bp. The PCR products amplified using primers specific for the cytochrome oxidase subunit I gene showed 861 base pair bands in all four samples analyzed. The obtained sequences of cytochrome oxidase subunit I from all four individual muscle larvae had 100% identical haplotypes except for one nucleotide transversion in one sequence. As a result of this study, valuable insights into T. britovi prevalence and phylogenetic distribution among Iranian golden jackals have been gained in terms of prevalence and phylogenic distribution.

Parasitology

Prevalence and risk factors associated with Dirofilaria immitis infection in dogs using practical methods in hospitals in Thailand

Volume 16, Issue 7, July 2025, Pages 415-419

Pansawut Sudjaidee, Sarut Muangsri, Wipa Khiewsalab, Suchawan Pornsukarom

Abstract To date, routine diagnosis of canine heartworm disease relies on detecting Dirofilaria immitis antigens in blood or the microscopic examination of blood smears. However, each method has limitations, potentially leading to life-threatening situations for infected dogs. This study aimed to determine the prevalence of filarial infection, risk factors, and appropriate detection methods in practical clinics. A total of 113 dog blood samples from two provinces in Thailand (Chonburi = 73 and Nakhon Nayok = 40) were analyzed for D. immitis infection using buffy coat smears, commercial immunochromatographic tests (SNAP 4Dx Plus), and polymerase chain reaction. Overall prevalence was 51.53% (58/113) across all methods. The positivity rates were 15.38% (12/78) for buffy coat smears, 8.00% (4/50) for SNAP 4Dx Plus, and 45.43% (51/113) for polymerase chain reaction. All positives from the test kits correlated with other methods. A significantly high prevalence was observed in dogs under 2 years old. Accessibility to pet care services in urban areas appeared to have a protective effect. Positive commercial test results could confirm D. immitis infection. However, selecting more than one diagnostic technique in clinics, including morphological examination, immunochromatography, or molecular methods, is recommended for early and more accurate detection, along with the promotion of heartworm prevention strategies.

Pathology

Investigating serological evidence of Schmallenberg virus in cattle in eastern Algeria

Volume 16, Issue 3, March 2025, Pages 129-132

Nadia Djellata, Abdelkrim Yahimi, Christian Hanzen

Abstract Schmallenberg virus (SBV) is a newly identified virus belonging to the Orthobunyavirus genus, of the Bunyaviridae family, and transmitted by haematophagous arthropods in particular mosquitoes and biting midges of the Culicoides genus. The SBV is known to cause reproductive disorders in ruminants mainly abortions, stillbirths and congenital malformations (hydranencephaly and arthrogryposis syndromes). The aim of this study was to investigate the presence of SBV in dairy cattle in Algeria. Between September 2023 and December 2023, blood serum samples from 300 dairy cows from 75 dairy farms in north eastern Algeria were tested for SBV antibodies using a commercial indirect enzyme-linked immunosorbent assay kit. Individual seroprevalence was 38.33% (115/300; 95.00% confidence interval: 32.83 - 43.83), while herd seroprevalence was 41.33% (31/75; 95.00% confidence interval: 30.18 - 52.47). In addition, the results of this study revealed that SBV seroprevalence at individual or herd level was high and not negligible confirming the presence of SBV in the regions studied in Algeria. In conclusion, more in-depth studies are recommended concerning the molecular proof, origin and pathogenesis of SBV in ruminants mainly those linked to reproductive disorders as well as the study of the various associated risk factors.

Clinical Pathology

Molecular detection of bovine leukosis virus in naturally infected dairy and dual-purpose cattle in Mexico

Volume 14, Issue 8, August 2023, Pages 457-460

Rosa María Cordero-Pulido, David Itzcóatl Martínez-Herrera, Héctor Vivanco-Cid, José Alfredo Villagómez-Cortés, Maja Louise Arendt, Peter Grube-Pagola, Carlos Alonso Domínguez-Alemán

Abstract The objective of this study was to determine the prevalence of bovine leukosis virus (BLV) in specialized and dual-purpose dairy cows located in the central zone of Veracruz state in Mexico, using endpoint polymerase chain reaction (PCR). The study population consisted of 307 specialized dairy cows and 95 dual-purpose cows from 13 municipalities located in the study area. All cows were apparently healthy and ≥ 3 years old. Cows were stratified by age (3 - 5, 6 - 8 and ≥ 9 years). The overall prevalence of infection was 6.96%; the calculated prevalence in dairy cows was 7.82% and in dual-purpose cows it was 4.21%. The municipality with the highest proportion was Acajete (14.28%), followed by Huatusco and Tomatlán (11.53%). The association analysis confirms the infection's independence to the cows' productive purpose. The results by age strata were 3 - 5 (4.60%), 6 - 8 (8.00%) and ≥ 9 (18.40%) with X2 = 9.96, with an odds ratio of 4.68 for the stratum ≥ 9 years with a significant difference. The present study determined the prevalence of proviral DNA of BLV in dairy and dual-purpose cows in six municipalities in the central zone of Veracruz state, Mexico, using endpoint PCR.

Parasitology

A serological and parasitological study of Toxoplasma gondii infection in stray cats of Mashhad, Khorasan Razavi province, Iran

Volume 10, Issue 2, Spring 2019, Pages 119-123

Majid Khodaverdi, Gholamreza Razmi

Abstract The aim of the present study was to determine seroprevalence of Toxoplasma gondii infectionin stray cats and correlation with oocyst shedding and IFN-γ concentration. From April to August 2016, one hundred fifty-nine stray cats were captured from various localities in Mashhad area. The blood and fecal samples were collected from each cat. The serum samples were examined to detect antibodies against T. gondii infection by ELISA assay and the fecal samples were microscopically examined for T. gondii oocyst detection. The concentration changes of IFN-γ in serum samples of seropositive and seronegative cats were measured using ELISA kit. The results showed that59.12% (94/159) of cats had antibodies against T. gondii infection. The seroprevalence of T. gondii infection in the adult cats above three years olds was higher than other groups. Regarding gender, month and region factors, the difference of seroprevalence of T. gondii infection was not significant. In this study, the Toxoplasma/Hammondia like oocyst (THLO) were detected in 2.56% (4/156) in fecal samples of one seropositive and three seronegative cats. Results also showed that the mean value for IFN-γ concentration in the seropositive cats was significantly higher than that of the seronegative cats. Based on the results, the high percentages of stray cats were infected with T. gondii in this area. The IFN-γ concentration of seropositive cats was higher than that of the seronegative cats.

Epidemiology

Distribution of Nosema Spp. in climatic regions of Iran

Volume 9, Issue 3, Summer 2018, Pages 259-263

Baharak Mohammadian, Saied Bokaie, Mojtaba Moharrami, Sedighe Nabian, Mohammad Forsi

Abstract Nosemosis is one of the most prevalent bee diseases in the world causing significant ‎economic losses in the global bee-keeping industry. This cross-sectional study was conducted during April-September, 2016 to investigate the prevalence of nosemosis in different climatic regions of Iran. A total of 183 ‎apiaries were selected based on cluster sampling and the climate of apiaries under study was classified using Domarten method. In each apiary, five percent of the colonies were ‎ randomly sampled. A total of 183 adult bee samples were taken and examined by microscopic and polymerase chain reaction (PCR) methods for the presence of Nosema infections. According to the results, infection caused by Nosema ceranae was observed in all regions under study. The prevalence of N. ceranae was 46.40% (42.70–50.10). However, infection with Nosema apis was not observed in the samples in either pure form or as ‎associated infection. Based on the results of PCR, the prevalenceof N. ceranae was ‎53.80% (46.60– 61.00) ‎ in ‎humid, ‎71.00% (53.70–77.50) ‎ in semi-humid‎, ‎68.10% (61.40–74.80) ‎ in very humid, ‎29.40% (22.70–36.10) in arid, ‎34.30% (27.40–41.20) in semi-‎arid and ‎24.00% (17.90–30.00)‎ in Mediterranean climates. The prevalence of ‎infection in different climatic zones of the country was found to have significant ‎differences (p < 0.001). ‎ According to the findings, N. ceranae ‎ was the only Nosema species in honeybees with a broad geographical dispersion in Iran. It seems that climate can influence the prevalence of mentioned parasite. ‎

Prevalence of bovine leukemia virus (BLV) infection in the northeast of Iran

Volume 5, Issue 2, June 2014, Pages 135-139

Shalaleh Mousavi, Alireza Haghparast, Gholamreza Mohammadi, Seyed-Elias Tabatabaeizadeh

Abstract The purpose of this study was to determine the prevalence of bovine leukemia virus (BLV) in Khorasan Razavi and Khorasan Shomali provinces which are the main provinces located in the northeast of Iran. Total number of 429 blood samples were collected from industrial dairy herds. The samples were categorized based on province, age (2-3, 4-6, and 7-10 years old), calving (≤ 2, 3-5, and > 5) and herd size (≤ 100, 101-250, and > 250) and examined by indirect ELISA. The results of this study showed that 109 (25.4%) out of 429 serum samples were BLV seropositive. The BLV prevalence among cattle of dairy herds of Khorasan Razavi and Khorasan Shomali provinces were 29.8% and 1.5%, respectively. The results showed that the number of seropositive animals was increased significantly with the age (p < 0.05). The infection rate in animals 2-3, 4-6 and 7-10 years old were 12.1%, 26.7% and 45.6%, respectively. It was shown that BLV prevalence according to calving ≤ 2, 3-5 and > 5 was 15.5%, 33.0% and 42.9%, respectively, with a significant difference between calving ≤ 2 and > 5 (p < 0.001). The prevalence of BLV among herd size of ≤ 100, 101-250 and > 250 was 19.7%, 14.3% and 42.1%, respectively, which was significantly higher in herds with more than 250 cattle (p < 0.05). This study revealed that BLV infection in dairy herds of northeast of Iran was influenced by geographical location (province), age, calving and herd size.

Prevalence of immunoglobulin G (IgG) antibody to Neospora caninum in dairy cattle of Hamedan province, west of Iran

Volume 5, Issue 2, June 2014, Pages 149-152

Jamal Gharekhani, Hamidreza Haddadzadeh, Alireza Bahonar

Abstract Bovine neosporosis caused by the apicomplexan protozoan parasite N. caninum, was initially recognized in 1989 and is now reported as a leading infectious cause of reproductive failure in dairy cattle in world wide. The aim of this study was to determine the seroprevalence of N. caninum infection in industrial dairy cattle of Hamedan province (west of Iran) by ELISA method. Blood samples were collected from 492 cattle in 41 farms. Antibodies to N. caninum were found in 63(12.80%) sera. A Significant difference was observed between seropositive cattle and dog presence in farm, dog contact with herd, abortion history and herd population. No significant differences were found between seropositive cattle and age as well as breed. This study is the first report of N. caninum infection in dairy cattle farms in Hamedan province. As per our knowledge, Neospora is an important factor in abortion of cattle in this region. Therefore, comprehensive studies for control strategies and improving management of dairy farms is necessary.

Survey of dermatological conditions in a population of domestic dogs in Mashhad, northeast of Iran (2007-2011)

Volume 4, Issue 2, June 2013, Pages 99-103

Javad Khoshnegah, Ahmad Reza Movassaghi, Mehrnaz Rad

Abstract In order to assess the prevalence of skin diseases in dogs encountered in a first opinion university small animal clinic, 1299 Iranian domestic dogs presented from September 2007 through March 2011 to the Ferdowsi University of Mashhad Veterinary Teaching Hospital, were examined. Dermatological disorders were noted in 17.00% (221/1299) of all the dogs examined. Pruritus was the most common presenting sign, accounting for 25.35% of the dermatological consultations. It was followed by erythema, maculo-papular-pustular eruptions (16.97%), erosive or ulcerative lesions (16.74%), scaling or crusting (13.02%), alopecia (8.84%) and visible ectoparasites (7.44%). The most common primary final diagnoses were superficial pyoderma, cutaneous manifestations of canine leishmaniasis, flea infestation and allergy, tick infestation, atopic dermatitis, scabies, unspecified dermatoses, otitis, furunculosis and food allergy. There were no apparent age or sex predilections for dermatological disease as a whole. Spitz (odds ratio = 3.38; p = 0.001), Terriers (odds ratio = 2.52; p < 0.001) and German Shepherds (odds ratio = 1.90; p = 0.001) appeared to be at increased risk for dermatological disease. In addition, Khorasani large cross breed dogs (odds ratio = 0.36; p = 0.003) and mixed breed dogs (odds ratio = 0.33; p < 0.001) showed decreased risk for dermatological conditions. To the best of our knowledge, this is the first survey study on canine dermatological conditions carried out in Iran.

Prevalence of cattle flukes infection at Andassa Livestock Research Center in north-west of Ethiopia

Volume 3, Issue 2, June 2012, Pages 85-89

Asressa Yeneneh, Hassen Kebede, Tewodros Fentahun, Mersha Chanie

Abstract  A cross sectional study was carried out from October 2010 to March 2011 at Andassa Livestock Research Center, North-West Ethiopia. The objective was to determine the prevalence of cattle flukes infection. Faecal samples were collected from a total of 384 cattle, cross breed (n= 39) and Fogera breed (n=345) of all age groups and sex. Sedimentation technique was employed for the recovery of fluke eggs from freshly collected fecal sample. The results indicated that the overall prevalence of bovine flukes infection was 60.42%. In this study, the highest prevalence was recorded from Paramphistomosis (45.83%) followed by Fasciolosis (23.96%), and Schistosomosis (9.89%). The prevalence of flukes infection was higher in age group 1- 2 years old. There was significant difference in case of Paramphistomosis among age groups. No significant association was found between crossed breeds and sex groups for fluke’s infection. The prevalence of Paramphistomosis was high in cross breed (58.97%) than Fogera breed (44.35%). However, in both cases, there was no significant difference. The result of the present study revealed that the prevalence of major bovine fluke infection in the study area was relatively low and is the definite proof of active infection.

A Retrospective Survey of Fasciolosis and Dicrocoeliosis in Slaughtered Animals in Meisam Abattoir, Tehran, Iran (2005-2008)

Volume 1, Issue 3, December 2010, Pages 174-178

Ali Khanjari, Razieh Partovi, Sepideh Abbaszadeh, Ghazal Nemati, Alireza Bahonar, Ali Misaghi, Afshin Akhondzadeh-Basti, Ahmad Alizadeh-Ilanjegh, Afshin Motaghifar

Abstract Fasciolosis and dicrocoeliosis are endemic parasitic diseases in Middle East especially Iran, which making significant economic problems. This retrospective survey has been done to evaluate contamination rate of slaughtered animals with fasciolosis and dicrocoeliosis at Meisam abattoir, in Tehran, Iran. In this survey, prevalence rate of fasciolosis and dicrocoeliosis in slaughtered animals in a three-year period (2005-2008) has been analyzed. The prevalence rates of fasciolosis and dicrocoeliosis in cattle were 2.20 % and 2.5 %, and the rates in sheep were 2.01 % and 5.83 %, respectively. The average annual direct economic loss incurred as a result of condemnation of ovine and bovine infected livers due to fasciolosis and dicrocoeliosis were estimated as high as 227,907 USD. The results of current survey revealed the rate of dicrocoeliosis is higher than fasciolosis. Our work proved that the highest frequency rate of the fasciolosis and dicrocoeliosis in cattle was in summer and spring, respectively. Whereas winter and autumn had the highest prevalence rate of fasciolosis and dicrocoeliosis in sheep.